Protein glycation and drought response of pea (Pisum sativum L.) root nodule proteome: a proteomics approach

Authors

  • Julia Shumilina Department of Biochemistry, Faculty of Biology, Saint Petersburg State University, Srednii pr., 41–43, Saint Petersburg, 199004, Russian Federation; Department of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, Halle, 06120, Germany https://orcid.org/0000-0002-9747-5779
  • Daria Gorbach Department of Biochemistry, Faculty of Biology, Saint Petersburg State University, Srednii pr., 41–43, Saint Petersburg, 199004, Russian Federation https://orcid.org/0000-0001-6836-5004
  • Veronika Popova Department of Biochemistry, Faculty of Biology, Saint Petersburg State University, Srednii pr., 41–43, Saint Petersburg, 199004, Russian Federation; Department of Plant Physiology and Biochemistry, Faculty of Biology, Saint Petersburg State University, Universitetskaya nab., 7–9, Saint Petersburg, 199034, Russian Federation https://orcid.org/0000-0002-3486-4232
  • Alexander Tsarev Department of Biochemistry, Faculty of Biology, Saint Petersburg State University, Srednii pr., 41–43, Saint Petersburg, 199004, Russian Federation; Department of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, Halle, 06120, Germany https://orcid.org/0000-0002-6718-2430
  • Alena Kuznetsova Department of Biochemistry, Faculty of Biology, Saint Petersburg State University, Srednii pr., 41–43, Saint Petersburg, 199004, Russian Federation; Department of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, Halle, 06120, Germany https://orcid.org/0000-0003-0347-8280
  • Maria Grashina Department of Biochemistry, Faculty of Biology, Saint Petersburg State University, Srednii pr., 41–43, Saint Petersburg, 199004, Russian Federation https://orcid.org/0000-0002-9022-1549
  • Mandy Dorn Department of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, Halle, 06120, Germany
  • Elena Lukasheva Department of Biochemistry, Faculty of Biology, Saint Petersburg State University, Srednii pr., 41–43, Saint Petersburg, 199004, Russian Federation https://orcid.org/0000-0002-0889-2395
  • Natalia Osmolovskaya Department of Plant Physiology and Biochemistry, Faculty of Biology, Saint Petersburg State University, Universitetskaya nab., 7–9, Saint Petersburg, 199034, Russian Federation https://orcid.org/0000-0001-8764-8552
  • Ekaterina Romanovskaya Department of Biochemistry, Faculty of Biology, Saint Petersburg State University, Srednii pr., 41–43, Saint Petersburg, 199004, Russian Federation https://orcid.org/0000-0001-8912-5886
  • Vladimir Zhukov Department of Biotechnology, All-Russia Research Institute for Agricultural Microbiology, Shosse Podbel'skogo, 3, Saint Petersburg, 190608, Russian Federation https://orcid.org/0000-0002-2411-9191
  • Christian Ihling Department of Pharmaceutical Chemistry and Bioanalytics, Institute of Pharmacy, Martin-Luther University Halle-Wittenberg, Halle, 06120, Germany
  • Tatiana Grishina Department of Biochemistry, Faculty of Biology, Saint Petersburg State University, Srednii pr., 41–43, Saint Petersburg, 199004, Russian Federation https://orcid.org/0000-0002-5306-2980
  • Tatiana Bilova Department of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, Halle, 06120, Germany; Department of Plant Physiology and Biochemistry, Faculty of Biology, Saint Petersburg State University, Universitetskaya nab., 7–9, Saint Petersburg, 199034, Russian Federation https://orcid.org/0000-0002-6024-3667
  • Andrej Frolov Department of Biochemistry, Faculty of Biology, Saint Petersburg State University, Srednii pr., 41–43, Saint Petersburg, 199004, Russian Federation; Department of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, Halle, 06120, Germany https://orcid.org/0000-0003-3250-5858

DOI:

https://doi.org/10.21638/spbu03.2021.303

Abstract

Because of ongoing climate change, drought is becoming the major factor limiting productivity of all plants, including legumes. As these protein-rich crops form symbiotic associations with rhizobial bacteria — root nodules — they readily lose their productivity under drought conditions. Understanding the underlying molecular mechanisms might give access to new strategies to preserve the productivity of legume crops under dehydration. As was shown recently, development of drought response is accompanied by alterations in the patterns of protein glycation and formation of advanced glycation end products (AGEs) that might be a part of unknown regulatory mechanisms. Therefore, here we address the effects of moderate drought on protein dynamics and AGE patterns in pea (Pisum sativum) root nodules. For this, plants inoculated with rhizobial culture were subjected to osmotic stress for one week, harvested, the total protein fraction was isolated from root nodules by phenol extraction, analyzed by bottom-up LC-MS-based proteomics, and AGE patterns were characterized. Surprisingly, despite the clear drought-related changes in phenotype and stomatal conductivity, only minimal accompanying expressional changes (14 rhizobial and 14 pea proteins, mostly involved in central metabolism and nitrogen fixation) could be observed. However, 71 pea and 97 rhizobial proteins (mostly transcription factors, ABC transporters and effector enzymes) were glycated, with carboxymethylation being the major modification type. Thereby, the numbers of glycated sites in nodule proteins dramatically decreased upon stress application. It might indicate an impact of glycation in regulation of transport, protein degradation, central, lipid and nitrogen metabolism. The data are available at Proteome Xchange (accession: PXD024042).

Keywords:

advanced glycation end products (AGEs), drought stress, glycation, pea (Pisum sativum), polyethylene glycol (PEG), proteomics, root nodules

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2021-11-12

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Shumilina, J., Gorbach, D., Popova, V., Tsarev, A., Kuznetsova, A., Grashina, M., … Frolov, A. (2021). Protein glycation and drought response of pea (<em>Pisum sativum</em> L.) root nodule proteome: a proteomics approach. Biological Communications, 66(3), 210–224. https://doi.org/10.21638/spbu03.2021.303

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Vol. 66 No. 3 (2021)

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